Carsten Wiuf

Carsten Wiuf

Professor

ORCID: 0000-0002-1302-4445

Publication year:
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1 - 50 out of 149Page size: 50
  1. 1997

  2. On the number of ancestors to a DNA sequence

    Wiuf, Carsten & Hein, J., 1 Nov 1997, In: Genetics. 147, 3, p. 1459-1468 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. 1998

  4. A codon-based model designed to describe lentiviral evolution

    Pedersen, A. M. K., Wiuf, Carsten & Christiansen, F. B., 1 Jan 1998, In: MOLECULAR BIOLOGY AND EVOLUTION . 15, 8, p. 1069-1081 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. 1999

  6. Conditional genealogies and the age of a neutral mutant

    Wiuf, Carsten & Donnelly, P., 1 Jan 1999, In: Theoretical Population Biology. 56, 2, p. 183-201 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Recombination as a point process along sequences

    Wiuf, Carsten & Hein, J., 1 Jan 1999, In: Theoretical Population Biology. 55, 3, p. 248-259 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. The ancestry of a sample of sequences subject to recombination

    Wiuf, Carsten & Hein, J., 1 Mar 1999, In: Genetics. 151, 3, p. 1217-1228 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. 2000

  10. A coalescence approach to gene conversion

    Wiuf, Carsten, 1 Jan 2000, In: Theoretical Population Biology. 57, 4, p. 357-367 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. On the genealogy of a sample of neutral rare alleles

    Wiuf, Carsten, 1 Jan 2000, In: Theoretical Population Biology. 58, 1, p. 61-75 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. The coalescent with gene conversion

    Wiuf, Carsten & Hein, J., 1 May 2000, In: Genetics. 155, 1, p. 451-462 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Statistical alignment: Computational properties, homology testing and goodness-of-fit

    Hein, J., Wiuf, Carsten, Knudsen, B., Møller, M. B. & Wibling, G., 8 Sep 2000, In: Journal of Molecular Biology. 302, 1, p. 265-279 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. 2001

  15. A simulation study of the reliability of recombination detection methods

    Wiuf, Carsten, Christensen, T. & Hein, J., 1 Jan 2001, In: MOLECULAR BIOLOGY AND EVOLUTION . 18, 10, p. 1929-1939 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Rare alleles and selection

    Wiuf, Carsten, 1 Jan 2001, In: Theoretical Population Biology. 59, 4, p. 287-296 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Recombination analysis using directed graphical models [4]

    Strimmer, K., Wiuf, Carsten & Moulton, V., 1 Jan 2001, In: MOLECULAR BIOLOGY AND EVOLUTION . 18, 1, p. 97-99 3 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  18. Do ΔF508 heterozygotes have a selective advantage?

    Wiuf, Carsten, 29 Aug 2001, In: Genetical Research. 78, 1, p. 41-47 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Recombination in human mitochondrial DNA?

    Wiuf, Carsten, 17 Nov 2001, In: Genetics. 159, 2, p. 749-756 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. 2002

  21. On the minimum number of topologies explaining a sample of DNA sequences

    Wiuf, Carsten, 1 Dec 2002, In: Theoretical Population Biology. 62, 4, p. 357-363 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. 2003

  23. Some notes on the combinatorial properties of haplotype tagging

    Wiuf, Carsten, Laidlaw, Z. & Stumpf, M. P. H., 1 Jan 2003, In: Mathematical Biosciences. 185, 2, p. 205-216 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Simulating haplotype blocks in the human genome

    Posada, D. & Wiuf, Carsten, 1 Feb 2003, In: Bioinformatics. 19, 2, p. 289-290 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Inferring population history from genealogical trees

    Wiuf, Carsten, 1 Mar 2003, In: Journal of Mathematical Biology. 46, 3, p. 241-264 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. A coalescent model of recombination hotspots

    Wiuf, Carsten & Posada, D., 1 May 2003, In: Genetics. 164, 1, p. 407-417 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. 2004

  28. Inference on Recombination and Block Structure Using Unphased Data

    Wiuf, Carsten, 1 Jan 2004, In: Genetics. 166, 1, p. 537-545 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Identification of endogenous retroviral reading frames in the human genome

    Villesen, P., Aagaard, L., Wiuf, Carsten & Pedersen, F. S., 11 Oct 2004, In: Retrovirology. 1, 32.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. The probability and chromosomal extent of trans-specific polymorphism

    Wiuf, Carsten, Zhao, K., Innan, H. & Nordborg, M., 1 Dec 2004, In: Genetics. 168, 4, p. 2363-2372 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. 2005

  32. High-density single nucleotide polymorphism array defines novel stage and location-dependent allelic imbalances in human bladder tumors

    Koed, K., Wiuf, Carsten, Christensen, L. L., Wikman, F. P., Zieger, K., Møller, K., Von Der Maase, H. & Ørntoft, T. F., 1 Jan 2005, In: Cancer Research. 65, 1, p. 34-45 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Subnets of scale-free networks are not scale-free: Sampling properties of networks

    Stumpf, M. P. H., Wiuf, Carsten & May, R. M., 22 Mar 2005, In: Proceedings of the National Academy of Sciences of the United States of America. 102, 12, p. 4221-4224 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Sampling properties of random graphs: The degree distribution

    Stumpf, M. P. H. & Wiuf, Carsten, 1 Sep 2005, In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 72, 3, 036118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Role of activating fibroblast growth factor receptor 3 mutations in the development of bladder tumors

    Zieger, K., Dyrskjøt, L., Wiuf, Carsten, Jensen, J. L., Andersen, C. L., Jensen, K. M. E. & Ørntoft, T. F., 1 Nov 2005, In: Clinical Cancer Research. 11, 21, p. 7709-7719 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Statistical model selection methods applied to biological networks

    Stumpf, M. P. H., Ingram, P. J., Nouvel, I. & Wiuf, Carsten, 1 Dec 2005, Transactions on Computational systems Biology III. p. 65-77 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 3737 LNBI).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  37. 2006

  38. Binomial subsampling

    Wiuf, Carsten & Stumpf, M. P. H., 1 Jan 2006, In: Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 462, 2068, p. 1181-1195 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. SOX4 expression in bladder carcinoma: Clinical aspects and in vitro functional characterization

    Aaboe, M., Birkenkamp-Demtroder, K., Wiuf, Carsten, Sørensen, F. B., Thykjaer, T., Sauter, G., Jensen, K. M. E., Dyrskjøt, L. & Ørntoft, T., 1 Apr 2006, In: Cancer Research. 66, 7, p. 3434-3442 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. A likelihood approach to analysis of network data

    Wiuf, Carsten, Brameier, M., Hagberg, O. & Stumpf, M. P. H., 16 May 2006, In: Proceedings of the National Academy of Sciences of the United States of America. 103, 20, p. 7566-7570 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Convergence properties of the degree distribution of some growing network models

    Hagberg, O. & Wiuf, Carsten, 1 Aug 2006, In: Bulletin of Mathematical Biology. 68, 6, p. 1275-1291 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Genotyping and annotation of Affymetrix SNP arrays

    Lamy, P., Andersen, C. L., Wikman, F. P. & Wiuf, Carsten, 21 Sep 2006, In: Nucleic Acids Research. 34, 14, e100.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Consistency of estimators of population scaled parameters using composite likelihood

    Wiuf, Carsten, 1 Nov 2006, In: Journal of Mathematical Biology. 53, 5, p. 821-841 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. The effects of incomplete protein interaction data on structural and evolutionary inferences

    de Silva, E., Thorne, T., Ingram, P., Agrafioti, I., Swire, J., Wiuf, Carsten & Stumpf, M. P. H., 3 Nov 2006, In: BMC Biology. 4, 39.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Are microRNAs located in genomic regions associated with cancer?

    Lamy, P., Andersen, C. L., Dyrskjøt, L., Tørring, N., Ørntoft, T. & Wiuf, Carsten, 20 Nov 2006, In: British Journal of Cancer. 95, 10, p. 1415-1418 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. 2007

  47. Frequent occurrence of uniparental disomy in colorectal cancer

    Andersen, C. L., Wiuf, Carsten, Kruhøffer, M., Korsgaard, M., Laurberg, S. & Ørntoft, T. F., 1 Jan 2007, In: Carcinogenesis. 28, 1, p. 38-48 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Genome-wide analysis of allelic imbalance in prostate cancer using the Affymetrix 50K SNP mapping array

    Tørring, N., Borre, M., Sørensen, K. D., Andersen, C. L., Wiuf, Carsten & Ørntoft, T. F., 12 Feb 2007, In: British Journal of Cancer. 96, 3, p. 499-506 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Co-clustering and visualization of gene expression data and gene ontology terms for Saccharomyces cerevisiae using self-organizing maps

    Brameier, M. & Wiuf, Carsten, 1 Apr 2007, In: Journal of Biomedical Informatics. 40, 2, p. 160-173 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Two variance results in population genetics theory

    Ewens, W. J., Choudhury, A. R., Lewontin, R. C. & Wiuf, Carsten, 1 Apr 2007, In: Mathematical Population Studies. 14, 2, p. 93-110 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. SNPTools: A software tool for visualization and analysis of microarray data

    Sørensen, F. J., Andersen, C. L. & Wiuf, Carsten, 15 Jun 2007, In: Bioinformatics. 23, 12, p. 1550-1552 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Evolution at the system level: the natural history of protein interaction networks

    Stumpf, M. P. H., Kelly, W. P., Thorne, T. & Wiuf, Carsten, 1 Jul 2007, In: Trends in Ecology and Evolution. 22, 7, p. 366-373 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  53. A periodic pattern of SNPs in the human genome

    Madsen, B. E., Villesen, P. & Wiuf, Carsten, 1 Oct 2007, In: Genome Research. 17, 10, p. 1414-1419 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum

    Ratmann, O., Jørgensen, O., Hinkley, T., Stumpf, M., Richardson, S. & Wiuf, Carsten, 1 Nov 2007, In: PLOS Computational Biology. 3, 11, p. 2266-2278 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays

    Lamy, P., Andersen, C. L., Dyrskjot, L., Torring, N. & Wiuf, Carsten, 9 Nov 2007, In: BMC Bioinformatics. 8, 434.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Conflicting results in SNP genotype assessment

    Hansen, L. L., Madsen, B. E., Pedersen, K. & Wiuf, Carsten, 1 Dec 2007, In: BioTechniques. 43, 6, p. 756-762 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Ab initio identification of human microRNAs based on structure motifs

    Brameier, M. & Wiuf, Carsten, 18 Dec 2007, In: BMC Bioinformatics. 8, 478.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. 2008

  59. Importance sampling for the infinite sites model

    Hobolth, A., Uyenoyama, M. K. & Wiuf, Carsten, 1 Jan 2008, In: Statistical Applications in Genetics and Molecular Biology. 7, 1, 32.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Bioinformatic identification of FGF, p38-MAPK, and calcium signalling pathways associated with carcinoma in situ in the urinary bladder

    Herbsleb, M., Christensen, O. F., Thykjaer, T., Wiuf, Carsten, Borre, M., Ørntoft, T. F. & Dyrskjøt, L., 31 Jan 2008, In: BMC Cancer. 8, 37.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Estimating the size of the human interactome

    Stumpf, M. P. H., Thorne, T., De Silva, E., Stewart, R., Hyeong, J. A., Lappe, M. & Wiuf, Carsten, 13 May 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 19, p. 6959-6964 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. The association between genetic variants in hMLH1 and hMSH2 and the development of sporadic colorectal cancer in the Danish population

    Christensen, L. L., Madsen, B. E., Wikman, F. P., Wiuf, Carsten, Koed, K., Tjønneland, A., Olsen, A., Syvänen, A. C., Andersen, C. L. & Ørntoft, T. F., 11 Jun 2008, In: BMC Medical Genetics. 9, 52.

    Research output: Contribution to journal › Journal article › Research › peer-review

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