Carsten Wiuf

Carsten Wiuf

Professor

ORCID: 0000-0002-1302-4445

Publication year:
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101 - 149 out of 149Page size: 100
  1. 2008

  2. Germline mutation in RNASEL predicts increased risk of head and neck, uterine cervix and breast cancer

    Madsen, B. E., Ramos, E. M., Boulard, M., Duda, K., Overgaard, J., Nordsmark, M., Wiuf, Carsten & Hansen, L. L., 25 Jun 2008, In: PLOS ONE. 3, 6, e2492.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Short tandem repeats in human exons: A target for disease mutations

    Madsen, B. E., Villesen, P. & Wiuf, Carsten, 12 Sep 2008, In: BMC Genomics. 9, 410.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Estimating the size of the human interactome

    Stumpf, M. P. H., Thorne, T., De Silva, E., Stewart, R., Hyeong, J. A., Lappe, M. & Wiuf, Carsten, 13 May 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 19, p. 6959-6964 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. 2007

  6. Frequent occurrence of uniparental disomy in colorectal cancer

    Andersen, C. L., Wiuf, Carsten, Kruhøffer, M., Korsgaard, M., Laurberg, S. & Ørntoft, T. F., 1 Jan 2007, In: Carcinogenesis. 28, 1, p. 38-48 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Ab initio identification of human microRNAs based on structure motifs

    Brameier, M. & Wiuf, Carsten, 18 Dec 2007, In: BMC Bioinformatics. 8, 478.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Co-clustering and visualization of gene expression data and gene ontology terms for Saccharomyces cerevisiae using self-organizing maps

    Brameier, M. & Wiuf, Carsten, 1 Apr 2007, In: Journal of Biomedical Informatics. 40, 2, p. 160-173 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Two variance results in population genetics theory

    Ewens, W. J., Choudhury, A. R., Lewontin, R. C. & Wiuf, Carsten, 1 Apr 2007, In: Mathematical Population Studies. 14, 2, p. 93-110 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Conflicting results in SNP genotype assessment

    Hansen, L. L., Madsen, B. E., Pedersen, K. & Wiuf, Carsten, 1 Dec 2007, In: BioTechniques. 43, 6, p. 756-762 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays

    Lamy, P., Andersen, C. L., Dyrskjot, L., Torring, N. & Wiuf, Carsten, 9 Nov 2007, In: BMC Bioinformatics. 8, 434.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. A periodic pattern of SNPs in the human genome

    Madsen, B. E., Villesen, P. & Wiuf, Carsten, 1 Oct 2007, In: Genome Research. 17, 10, p. 1414-1419 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum

    Ratmann, O., Jørgensen, O., Hinkley, T., Stumpf, M., Richardson, S. & Wiuf, Carsten, 1 Nov 2007, In: PLOS Computational Biology. 3, 11, p. 2266-2278 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Evolution at the system level: the natural history of protein interaction networks

    Stumpf, M. P. H., Kelly, W. P., Thorne, T. & Wiuf, Carsten, 1 Jul 2007, In: Trends in Ecology and Evolution. 22, 7, p. 366-373 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

  15. SNPTools: A software tool for visualization and analysis of microarray data

    Sørensen, F. J., Andersen, C. L. & Wiuf, Carsten, 15 Jun 2007, In: Bioinformatics. 23, 12, p. 1550-1552 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Genome-wide analysis of allelic imbalance in prostate cancer using the Affymetrix 50K SNP mapping array

    Tørring, N., Borre, M., Sørensen, K. D., Andersen, C. L., Wiuf, Carsten & Ørntoft, T. F., 12 Feb 2007, In: British Journal of Cancer. 96, 3, p. 499-506 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. 2006

  18. SOX4 expression in bladder carcinoma: Clinical aspects and in vitro functional characterization

    Aaboe, M., Birkenkamp-Demtroder, K., Wiuf, Carsten, Sørensen, F. B., Thykjaer, T., Sauter, G., Jensen, K. M. E., Dyrskjøt, L. & Ørntoft, T., 1 Apr 2006, In: Cancer Research. 66, 7, p. 3434-3442 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Convergence properties of the degree distribution of some growing network models

    Hagberg, O. & Wiuf, Carsten, 1 Aug 2006, In: Bulletin of Mathematical Biology. 68, 6, p. 1275-1291 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Are microRNAs located in genomic regions associated with cancer?

    Lamy, P., Andersen, C. L., Dyrskjøt, L., Tørring, N., Ørntoft, T. & Wiuf, Carsten, 20 Nov 2006, In: British Journal of Cancer. 95, 10, p. 1415-1418 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Genotyping and annotation of Affymetrix SNP arrays

    Lamy, P., Andersen, C. L., Wikman, F. P. & Wiuf, Carsten, 21 Sep 2006, In: Nucleic Acids Research. 34, 14, e100.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. A likelihood approach to analysis of network data

    Wiuf, Carsten, Brameier, M., Hagberg, O. & Stumpf, M. P. H., 16 May 2006, In: Proceedings of the National Academy of Sciences of the United States of America. 103, 20, p. 7566-7570 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Binomial subsampling

    Wiuf, Carsten & Stumpf, M. P. H., 1 Jan 2006, In: Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 462, 2068, p. 1181-1195 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Consistency of estimators of population scaled parameters using composite likelihood

    Wiuf, Carsten, 1 Nov 2006, In: Journal of Mathematical Biology. 53, 5, p. 821-841 21 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. The effects of incomplete protein interaction data on structural and evolutionary inferences

    de Silva, E., Thorne, T., Ingram, P., Agrafioti, I., Swire, J., Wiuf, Carsten & Stumpf, M. P. H., 3 Nov 2006, In: BMC Biology. 4, 39.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. 2005

  27. High-density single nucleotide polymorphism array defines novel stage and location-dependent allelic imbalances in human bladder tumors

    Koed, K., Wiuf, Carsten, Christensen, L. L., Wikman, F. P., Zieger, K., Møller, K., Von Der Maase, H. & Ørntoft, T. F., 1 Jan 2005, In: Cancer Research. 65, 1, p. 34-45 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Statistical model selection methods applied to biological networks

    Stumpf, M. P. H., Ingram, P. J., Nouvel, I. & Wiuf, Carsten, 1 Dec 2005, Transactions on Computational systems Biology III. p. 65-77 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 3737 LNBI).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  29. Sampling properties of random graphs: The degree distribution

    Stumpf, M. P. H. & Wiuf, Carsten, 1 Sep 2005, In: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 72, 3, 036118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Subnets of scale-free networks are not scale-free: Sampling properties of networks

    Stumpf, M. P. H., Wiuf, Carsten & May, R. M., 22 Mar 2005, In: Proceedings of the National Academy of Sciences of the United States of America. 102, 12, p. 4221-4224 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Role of activating fibroblast growth factor receptor 3 mutations in the development of bladder tumors

    Zieger, K., Dyrskjøt, L., Wiuf, Carsten, Jensen, J. L., Andersen, C. L., Jensen, K. M. E. & Ørntoft, T. F., 1 Nov 2005, In: Clinical Cancer Research. 11, 21, p. 7709-7719 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. 2004

  33. Identification of endogenous retroviral reading frames in the human genome

    Villesen, P., Aagaard, L., Wiuf, Carsten & Pedersen, F. S., 11 Oct 2004, In: Retrovirology. 1, 32.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Inference on Recombination and Block Structure Using Unphased Data

    Wiuf, Carsten, 1 Jan 2004, In: Genetics. 166, 1, p. 537-545 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. The probability and chromosomal extent of trans-specific polymorphism

    Wiuf, Carsten, Zhao, K., Innan, H. & Nordborg, M., 1 Dec 2004, In: Genetics. 168, 4, p. 2363-2372 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. 2003

  37. Simulating haplotype blocks in the human genome

    Posada, D. & Wiuf, Carsten, 1 Feb 2003, In: Bioinformatics. 19, 2, p. 289-290 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. A coalescent model of recombination hotspots

    Wiuf, Carsten & Posada, D., 1 May 2003, In: Genetics. 164, 1, p. 407-417 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Inferring population history from genealogical trees

    Wiuf, Carsten, 1 Mar 2003, In: Journal of Mathematical Biology. 46, 3, p. 241-264 24 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Some notes on the combinatorial properties of haplotype tagging

    Wiuf, Carsten, Laidlaw, Z. & Stumpf, M. P. H., 1 Jan 2003, In: Mathematical Biosciences. 185, 2, p. 205-216 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. 2002

  42. On the minimum number of topologies explaining a sample of DNA sequences

    Wiuf, Carsten, 1 Dec 2002, In: Theoretical Population Biology. 62, 4, p. 357-363 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. 2001

  44. Recombination analysis using directed graphical models [4]

    Strimmer, K., Wiuf, Carsten & Moulton, V., 1 Jan 2001, In: MOLECULAR BIOLOGY AND EVOLUTION . 18, 1, p. 97-99 3 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  45. Do ΔF508 heterozygotes have a selective advantage?

    Wiuf, Carsten, 29 Aug 2001, In: Genetical Research. 78, 1, p. 41-47 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. A simulation study of the reliability of recombination detection methods

    Wiuf, Carsten, Christensen, T. & Hein, J., 1 Jan 2001, In: MOLECULAR BIOLOGY AND EVOLUTION . 18, 10, p. 1929-1939 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Rare alleles and selection

    Wiuf, Carsten, 1 Jan 2001, In: Theoretical Population Biology. 59, 4, p. 287-296 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Recombination in human mitochondrial DNA?

    Wiuf, Carsten, 17 Nov 2001, In: Genetics. 159, 2, p. 749-756 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. 2000

  50. Statistical alignment: Computational properties, homology testing and goodness-of-fit

    Hein, J., Wiuf, Carsten, Knudsen, B., Møller, M. B. & Wibling, G., 8 Sep 2000, In: Journal of Molecular Biology. 302, 1, p. 265-279 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. A coalescence approach to gene conversion

    Wiuf, Carsten, 1 Jan 2000, In: Theoretical Population Biology. 57, 4, p. 357-367 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. On the genealogy of a sample of neutral rare alleles

    Wiuf, Carsten, 1 Jan 2000, In: Theoretical Population Biology. 58, 1, p. 61-75 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. The coalescent with gene conversion

    Wiuf, Carsten & Hein, J., 1 May 2000, In: Genetics. 155, 1, p. 451-462 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. 1999

  55. Conditional genealogies and the age of a neutral mutant

    Wiuf, Carsten & Donnelly, P., 1 Jan 1999, In: Theoretical Population Biology. 56, 2, p. 183-201 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Recombination as a point process along sequences

    Wiuf, Carsten & Hein, J., 1 Jan 1999, In: Theoretical Population Biology. 55, 3, p. 248-259 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. The ancestry of a sample of sequences subject to recombination

    Wiuf, Carsten & Hein, J., 1 Mar 1999, In: Genetics. 151, 3, p. 1217-1228 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. 1998

  59. A codon-based model designed to describe lentiviral evolution

    Pedersen, A. M. K., Wiuf, Carsten & Christiansen, F. B., 1 Jan 1998, In: MOLECULAR BIOLOGY AND EVOLUTION . 15, 8, p. 1069-1081 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. 1997

  61. On the number of ancestors to a DNA sequence

    Wiuf, Carsten & Hein, J., 1 Nov 1997, In: Genetics. 147, 3, p. 1459-1468 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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