A likelihood approach to analysis of network data

Research output: Contribution to journalJournal articleResearchpeer-review

Biological, sociological, and technological network data are often analyzed by using simple summary statistics, such as the observed degree distribution, and nonparametric bootstrap procedures to provide an adequate null distribution for testing hypotheses about the network. In this article we present a full-likelihood approach that allows us to estimate parameters for general models of network growth that can be expressed in terms of recursion relations. To handle larger networks we have developed an importance sampling scheme that allows us to approximate the likelihood and draw inference about the network and how it has been generated, estimate the parameters in the model, and perform parametric bootstrap analysis of network data. We illustrate the power of this approach by estimating growth parameters for the Caenorhabditis elegans protein interaction network.

Original languageEnglish
JournalProceedings of the National Academy of Sciences of the United States of America
Volume103
Issue number20
Pages (from-to)7566-7570
Number of pages5
ISSN0027-8424
DOIs
Publication statusPublished - 16 May 2006
Externally publishedYes

    Research areas

  • Biological network, Importance sampling, Likelihood recursion, Network model, Random graph

ID: 203900448