Carsten Wiuf

Carsten Wiuf

Professor

ORCID: 0000-0002-1302-4445

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  1. A Beta-mixture model for dimensionality reduction, sample classification and analysis

    Laurila, K., Oster, B., Andersen, C. L., Lamy, P., Orntoft, T., Yli-Harja, O. & Wiuf, Carsten, 27 May 2011, In: BMC Bioinformatics. 12, 215.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays

    Lamy, P., Andersen, C. L., Dyrskjot, L., Torring, N. & Wiuf, Carsten, 9 Nov 2007, In: BMC Bioinformatics. 8, 434.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. A Markov chain approach to randomly grown graphs

    Knudsen, M. & Wiuf, Carsten, 9 Jul 2008, In: Journal of Applied Mathematics. 2008, 190836.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models

    Singh, A., Wiuf, Carsten, Behera, A. & Gopalkrishnan, M., 2019, DNA Computing and Molecular Programming - 25th International Conference, DNA 25, Proceedings. Liu, Y. & Thachuk, C. (eds.). Springer, p. 54-79 26 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 11648 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  5. Published

    A bimodular mechanism of calcium control in eukaryotes

    Tidow, H., Poulsen, L. R., Andreeva, A., Knudsen, M., Hein, K. L., Wiuf, Carsten, Palmgren, Michael & Nissen, P., 2012, In: Nature. 491, 7424, p. 468–472 5 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  6. A coalescence approach to gene conversion

    Wiuf, Carsten, 1 Jan 2000, In: Theoretical Population Biology. 57, 4, p. 357-367 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. A coalescent model of recombination hotspots

    Wiuf, Carsten & Posada, D., 1 May 2003, In: Genetics. 164, 1, p. 407-417 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. A codon-based model designed to describe lentiviral evolution

    Pedersen, A. M. K., Wiuf, Carsten & Christiansen, F. B., 1 Jan 1998, In: MOLECULAR BIOLOGY AND EVOLUTION . 15, 8, p. 1069-1081 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    A computational method to preclude multistationarity in networks of interacting species

    Feliu, Elisenda & Wiuf, Carsten, 2013, In: Bioinformatics. 29, 18, p. 2327-2334

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. A likelihood approach to analysis of network data

    Wiuf, Carsten, Brameier, M., Hagberg, O. & Stumpf, M. P. H., 16 May 2006, In: Proceedings of the National Academy of Sciences of the United States of America. 103, 20, p. 7566-7570 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. A periodic pattern of SNPs in the human genome

    Madsen, B. E., Villesen, P. & Wiuf, Carsten, 1 Oct 2007, In: Genome Research. 17, 10, p. 1414-1419 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    A proof of unlimited multistability for phosphorylation cycles

    Feliu, Elisenda, Rendall, A. D. & Wiuf, Carsten, 2020, In: Nonlinearity. 33, p. 5629–5658

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    A reaction network scheme for hidden Markov model parameter learning

    Wiuf, Carsten, Behera, A., Singh, A. & Gopalkrishnan, M., 2023, In: Journal of the Royal Society Interface. 20, 203, 20220877.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. A review of software for microarray genotyping

    Lamy, P., Grove, J. & Wiuf, Carsten, 1 Jan 2011, In: Human Genomics. 5, 4, p. 304-309 6 p.

    Research output: Contribution to journal › Review › Research › peer-review

  15. A simulation study of the reliability of recombination detection methods

    Wiuf, Carsten, Christensen, T. & Hein, J., 1 Jan 2001, In: MOLECULAR BIOLOGY AND EVOLUTION . 18, 10, p. 1929-1939 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Ab initio identification of human microRNAs based on structure motifs

    Brameier, M. & Wiuf, Carsten, 18 Dec 2007, In: BMC Bioinformatics. 8, 478.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Addition of flow reactions preserving multistationarity and bistability

    Cappelletti, D., Feliu, Elisenda & Wiuf, Carsten, 2020, In: Mathematical Biosciences. 320, 8 p., 108295.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Algebraic Statistics and Methods in Systems Biology

    Wiuf, Carsten, 12 Sep 2011, Handbook of Statistical Systems Biology. Wiley, p. 114-132 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  19. Published

    An algebraic approach to signaling cascades with N layers

    Feliu, Elisenda, Knudsen, M., Andersen, L. N. & Wiuf, Carsten, 2012, In: Bulletin of Mathematical Biology. 74, 1, p. 45-72 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. An algebro-topological description of protein domain structure

    Penner, R. C., Knudsen, M., Wiuf, Carsten & Andersen, J. E., 27 May 2011, In: PLoS ONE. 6, 5, e19670.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Are microRNAs located in genomic regions associated with cancer?

    Lamy, P., Andersen, C. L., Dyrskjøt, L., Tørring, N., Ørntoft, T. & Wiuf, Carsten, 20 Nov 2006, In: British Journal of Cancer. 95, 10, p. 1415-1418 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Association between genetic variation in a region on chromosome 11 and schizophrenia in large samples from Europe

    Rietschel, M., Mattheisen, M., Degenhardt, F., Kahn, R. S., Linszen, D. H., Os, J. V., Wiersma, D., Bruggeman, R., Cahn, W., de Haan, L., Krabbendam, L., Myin-Germeys, I., Mühleisen, T. W., Kirsch, P., Esslinger, C., Herms, S., Demontis, D., Steffens, M., Strohmaier, J., Haenisch, B. & 82 others, Breuer, R., Czerski, P. M., Giegling, I., Strengman, E., Schmael, C., Mors, O., Mortensen, P. B., Hougaard, D. M., Orntoft, T., Kapelski, P., Priebe, L., Basmanav, F. B., Forstner, A. J., Hoffmann, P. F. F., Meier, S., Nikitopoulos, J., Moebus, S., Alexander, M., Mössner, R., Wichmann, H., Schreiber, S., Rivandeneira, F., Hofman, A., Uitterlinden, A. G., Wienker, T. F., Schumacher, J., Hauser, J., Maier, W., Cantor, R., Erk, S., Schulze, T. G., Stefansson, H., Steinberg, S., Gustafsson, O., Sigurdsson, E., Petursson, H., Kong, A., Stefansson, K., Pietiläinen, O. P. H., Tuulio-Henriksson, A., Paunio, T., Lonnqvist, J., Suvisaari, J., Peltonen, L., Ruggeri, M., Tosato, S., Walshe, M., Murray, R., Collier, D. A., Clair, D. S., Hansen, T., Ingason, A., Jakobsen, K. D., Duong, L., Werge, T., Melle, I., Andreassen, O. A., Djurovic, S., Bitter, I., Réthelyi, J. M., Abramova, L., Kaleda, V., Golimbet, V., Jönsson, E. G., Terenius, L., Agartz, I., Winkel, R. V., Kenis, G., Hert, M. D., Veldink, J., Wiuf, Carsten, Didriksen, M., Craddock, N., Owen, M. J., O'Donovan, M. C., Børglum, A., Rujescu, D., Walter, H., Meyer-Lindenberg, A., Nöthen, M. M., Ophoff, R. A. & Cichon, S., 2012, In: Molecular Psychiatry. 17, 9, p. 906-917 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Binomial subsampling

    Wiuf, Carsten & Stumpf, M. P. H., 1 Jan 2006, In: Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 462, 2068, p. 1181-1195 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Bioinformatic identification of FGF, p38-MAPK, and calcium signalling pathways associated with carcinoma in situ in the urinary bladder

    Herbsleb, M., Christensen, O. F., Thykjaer, T., Wiuf, Carsten, Borre, M., Ørntoft, T. F. & Dyrskjøt, L., 31 Jan 2008, In: BMC Cancer. 8, 37.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Bounded coordinate-descent for biological sequence classification in high dimensional predictor space

    Ifrim, G. & Wiuf, Carsten, 16 Sep 2011, Proceedings of the 17th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD'11. p. 708-716 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

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