Carsten Wiuf

Carsten Wiuf

Professor

ORCID: 0000-0002-1302-4445

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  1. SOX4 expression in bladder carcinoma: Clinical aspects and in vitro functional characterization

    Aaboe, M., Birkenkamp-Demtroder, K., Wiuf, Carsten, Sørensen, F. B., Thykjaer, T., Sauter, G., Jensen, K. M. E., Dyrskjøt, L. & Ørntoft, T., 1 Apr 2006, In: Cancer Research. 66, 7, p. 3434-3442 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Modelling the contribution of family history and variation in single nucleotide polymorphisms to risk of schizophrenia: a Danish national birth cohort-based study

    Agerbo, E., Mortensen, P. B., Wiuf, Carsten, Pedersen, M. S., McGrath, J., Hollegaard, M. V., Nørgaard-Pedersen, B., Hougaard, D. M., Mors, O. & Pedersen, C. B., 2012, In: Schizophrenia Research. 134, 2-3, p. 246-252 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Preface

    Andersen, C. L. & Wiuf, Carsten, 1 Sep 2009, Statistics and Informatics in Molecular Cancer Research. Oxford University Press

    Research output: Chapter in Book/Report/Conference proceeding › Preface/postscript › Research

  4. Frequent occurrence of uniparental disomy in colorectal cancer

    Andersen, C. L., Wiuf, Carsten, Kruhøffer, M., Korsgaard, M., Laurberg, S. & Ørntoft, T. F., 1 Jan 2007, In: Carcinogenesis. 28, 1, p. 38-48 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Utilization of computer science for construction and characterization of DNA nano-structures

    Andersen, F. F., Villesen, P., Knudsen, B., Wiuf, Carsten, Desideri, A. & Knudsen, B. R., 1 Dec 2011, DNA Microarrays, Synthesis and Synthetic DNA. Nova Science Publishers, p. 317-330 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  6. Published

    Lyapunov Functions, Stationary Distributions, and Non-equilibrium Potential for Reaction Networks

    Anderson, D. F., Craciun, G., Gopalkrishnan , M. & Wiuf, Carsten, 2015, In: Bulletin of Mathematical Biology. 77, 9, p. 1744-1767

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Parchment Glutamine Index (PQI): A novel method to estimate glutamine deamidation levels in parchment collagen obtained from low-quality MALDI-TOF data

    Anila Bhuvanendran Nair, Bharath, Palomo, I. R., Markussen, Bo, Wiuf, Carsten, Fiddyment, S. & Collins, Matthew James, 2022, bioRxiv, 18 p.

    Research output: Working paper › Research › peer-review

  8. Published

    Stationary distributions of systems with discreteness-induced transitions

    Bibbona, E., Kim, J. & Wiuf, Carsten, 2020, In: Journal of the Royal Society Interface. 17, 168, 11 p., 20200243.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Ab initio identification of human microRNAs based on structure motifs

    Brameier, M. & Wiuf, Carsten, 18 Dec 2007, In: BMC Bioinformatics. 8, 478.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Co-clustering and visualization of gene expression data and gene ontology terms for Saccharomyces cerevisiae using self-organizing maps

    Brameier, M. & Wiuf, Carsten, 1 Apr 2007, In: Journal of Biomedical Informatics. 40, 2, p. 160-173 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Genome-wide study of association and interaction with maternal cytomegalovirus infection suggests new schizophrenia loci

    Børglum, A. D., Demontis, D., Grove, J., Pallesen, J., Hollegaard, M. V., Pedersen, C. B., Hedemand, A., Mattheisen, M., Uitterlinden, A., Nyegaard, M., Ørntoft, T., Wiuf, C. H., Didriksen, M., Nordentoft, M., Nöthen, M. M., Rietschel, M., Ophoff, R. A., Cichon, S., Yolken, R. H., Hougaard, D. M. & 3 others, Mortensen, P. B., Mors, O. & GROUP investigators10, G. I., Mar 2014, In: Molecular Psychiatry. 19, 3, p. 325-333 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Addition of flow reactions preserving multistationarity and bistability

    Cappelletti, D., Feliu, Elisenda & Wiuf, Carsten, 2020, In: Mathematical Biosciences. 320, 8 p., 108295.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Product-Form Poisson-Like Distributions and Complex Balanced Reaction Systems

    Cappelletti, D. & Wiuf, Carsten, 2016, In: S I A M Journal on Applied Mathematics. 76, 1, p. 411-432

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Uniform Approximation of Solutions by Elimination of Intermediate Species in Deterministic Reaction Networks

    Cappelletti, D. & Wiuf, Carsten, 2017, In: S I A M Journal on Applied Dynamical Systems. 16, 4, p. 2259-2286

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    The dynamics of stochastic mono-molecular reaction systems in stochastic environments

    Cappelletti, D., Pal Majumder, A. & Wiuf, Carsten, 2021, In: Stochastic Processes and Their Applications. 137, p. 106-148

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Elimination of intermediate species in multiscale stochastic reaction networks

    Cappelletti, D. & Wiuf, Carsten, 1 Oct 2016, In: Annals of Applied Probability. 26, 5, p. 2915-2958 44 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. The association between genetic variants in hMLH1 and hMSH2 and the development of sporadic colorectal cancer in the Danish population

    Christensen, L. L., Madsen, B. E., Wikman, F. P., Wiuf, Carsten, Koed, K., Tjønneland, A., Olsen, A., Syvänen, A. C., Andersen, C. L. & Ørntoft, T. F., 11 Jun 2008, In: BMC Medical Genetics. 9, 52.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Existence of a unique quasi-stationary distribution in stochastic reaction networks

    Christian Hansen, M. & Wiuf, Carsten, 1 Jan 2020, In: Electronic Journal of Probability. 25, 30 p., 45.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Identifying parameter regions for multistationarity

    Conradi, C., Feliu, Elisenda, Mincheva, M. & Wiuf, Carsten, 13 Aug 2017, In: P L o S Computational Biology (Online). 13, 10, 25 p., e1005751.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Coalescent models derived from birth–death processes

    Crespo, F. F., Posada, D. & Wiuf, Carsten, 2021, In: Theoretical Population Biology. 142, p. 1-11

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Clonal evolution in t(14;18)-positive follicular lymphoma, evidence for multiple common pathways, and frequent parallel clonal evolution

    D'Amore, F., Chan, E., Iqbal, J., Geng, H., Young, K., Xiao, L., Hess, M. M., Sanger, W. G., Smith, L., Wiuf, Carsten, Hagberg, O., Fu, K., Chan, W. C. & Dave, B. J., 15 Nov 2008, In: Clinical Cancer Research. 14, 22, p. 7180-7187 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Two variance results in population genetics theory

    Ewens, W. J., Choudhury, A. R., Lewontin, R. C. & Wiuf, Carsten, 1 Apr 2007, In: Mathematical Population Studies. 14, 2, p. 93-110 18 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    A computational method to preclude multistationarity in networks of interacting species

    Feliu, Elisenda & Wiuf, Carsten, 2013, In: Bioinformatics. 29, 18, p. 2327-2334

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Enzyme-sharing as a cause of multi-stationarity in signalling systems

    Feliu, Elisenda & Wiuf, Carsten, 2012, In: Journal of the Royal Society. Interface. 9, 71, p. 1224-1232 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Preclusion of switch behavior in networks with mass-action kinetics

    Feliu, Elisenda & Wiuf, Carsten, 1 Nov 2012, In: Applied Mathematics and Computation. 219, 4, p. 1449-1467 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Variable elimination in chemical reaction networks with mass-action kinetics

    Feliu, Elisenda & Wiuf, Carsten, 2012, In: S I A M Journal on Applied Mathematics. 72, 4, p. 959–981 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    A proof of unlimited multistability for phosphorylation cycles

    Feliu, Elisenda, Rendall, A. D. & Wiuf, Carsten, 2020, In: Nonlinearity. 33, p. 5629–5658

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Quasi-steady state and singular perturbation reduction for reaction networks with non-interacting species

    Feliu, Elisenda, Lax, C., Walcher, S. & Wiuf, Carsten, 2022, In: SIAM Journal on Applied Dynamical Systems. 21, 2, p. 782–816

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Node balanced steady states: Unifying and generalizing complex and detailed balanced steady states

    Feliu, Elisenda, Cappelletti, D. & Wiuf, Carsten, Jul 2018, In: Mathematical Biosciences. 301, p. 68-82

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Variable elimination in post-translational modification reaction networks with mass-action kinetics

    Feliu, Elisenda & Wiuf, Carsten, 2013, In: Journal of Mathematical Biology. 66, 1-2, p. 281-310

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Signaling cascades: consequences of varying substrate and phosphatase levels

    Feliu, Elisenda, Knudsen, M. & Wiuf, Carsten, 2012, In: Advances in Experimental Medicine and Biology. 736, p. 81-94 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Simplifying biochemical models with intermediate species

    Feliu, Elisenda & Wiuf, Carsten, 2013, In: Journal of the Royal Society. Interface. 10, 87, p. 20130484

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Finding the positive feedback loops underlying multi-stationarity

    Feliu, Elisenda & Wiuf, Carsten, 2015, In: B M C Systems Biology. 9, 22.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    An algebraic approach to signaling cascades with N layers

    Feliu, Elisenda, Knudsen, M., Andersen, L. N. & Wiuf, Carsten, 2012, In: Bulletin of Mathematical Biology. 74, 1, p. 45-72 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Critical Parameters for Singular Perturbation Reductions of Chemical Reaction Networks

    Feliu, Elisenda, Walcher, S. & Wiuf, Carsten, Dec 2022, In: Journal of Nonlinear Science. 32, 6, 41 p., 83.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Core signalling motif displaying multistability through multi-state enzymes

    Feng, S., Saez Cornellana, M., Wiuf, Carsten, Feliu, Elisenda & Soyer, O. S., Oct 2016, In: Journal of the Royal Society. Interface. 13, 123, 20160524.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    On the Liouville integrability of Edelstein's reaction system in R3

    Ferragut, A., Valls, C. & Wiuf, Carsten, 1 Mar 2018, In: Chaos, Solitons and Fractals. 108, p. 129-135 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Estimating admixture pedigrees of recent hybrids without a contiguous reference genome

    Garcia Erill, Genís, Hanghøj, Kristian Ebbesen, Heller, Rasmus, Wiuf, Carsten & Albrechtsen, Anders, 2023, In: Molecular Ecology Resources. 23, 7, p. 1604-1619 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Convergence properties of the degree distribution of some growing network models

    Hagberg, O. & Wiuf, Carsten, 1 Aug 2006, In: Bulletin of Mathematical Biology. 68, 6, p. 1275-1291 17 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Conflicting results in SNP genotype assessment

    Hansen, L. L., Madsen, B. E., Pedersen, K. & Wiuf, Carsten, 1 Dec 2007, In: BioTechniques. 43, 6, p. 756-762 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Cellular compartments cause multistability and allow cells to process more information

    Harrington, H. A., Feliu, Elisenda, Wiuf, Carsten & Stumpf, M. P. H., 16 Apr 2013, In: Biophysical Journal. 104, 8, p. 1824-1831 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Statistical alignment: Computational properties, homology testing and goodness-of-fit

    Hein, J., Wiuf, Carsten, Knudsen, B., Møller, M. B. & Wibling, G., 8 Sep 2000, In: Journal of Molecular Biology. 302, 1, p. 265-279 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Bioinformatic identification of FGF, p38-MAPK, and calcium signalling pathways associated with carcinoma in situ in the urinary bladder

    Herbsleb, M., Christensen, O. F., Thykjaer, T., Wiuf, Carsten, Borre, M., Ørntoft, T. F. & Dyrskjøt, L., 31 Jan 2008, In: BMC Cancer. 8, 37.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Importance sampling for the infinite sites model

    Hobolth, A., Uyenoyama, M. K. & Wiuf, Carsten, 1 Jan 2008, In: Statistical Applications in Genetics and Molecular Biology. 7, 1, 32.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. The genealogy, site frequency spectrum and ages of two nested mutant alleles

    Hobolth, A. & Wiuf, Carsten, 1 Jun 2009, In: Theoretical Population Biology. 75, 4, p. 260-265 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Maximum likelihood estimation and natural pairwise estimating equations are identical for three sequences and a symmetric 2-state substitution model

    Hobolth, A. & Wiuf, Carsten, 2024, In: Theoretical Population Biology. 156, p. 1-4

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Fast reactions with non-interacting species in stochastic reaction networks

    Hoessly, Linard David & Wiuf, Carsten, 2022, In: Mathematical Biosciences and Engineering. 19, 3, p. 2720-2749

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    On the sum of chemical reactions

    Hoessly, Linard David, Wiuf, Carsten & Xia, P., 2023, In: European Journal of Applied Mathematics. 34, 2, p. 303-325 23 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Genome-wide scans using archived neonatal dried blood spot samples

    Hollegaard, M. V., Grauholm, J., Børglum, A., Nyegaard, M., Nørgaard-Pedersen, B., Ørntoft, T., Mortensen, P. B., Wiuf, Carsten, Mors, O., Didriksen, M., Thorsen, P. & Hougaard, D. M., 4 Jul 2009, In: BMC Genomics. 10, 297.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Bounded coordinate-descent for biological sequence classification in high dimensional predictor space

    Ifrim, G. & Wiuf, Carsten, 16 Sep 2011, Proceedings of the 17th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD'11. p. 708-716 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

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